Publications

Scientific Publications

  1. Ramesh A, Srinivasan D, Subbarayan R, Chauhan A, Krishnamoorthy L, Kumar J, Krishnan M, & Shrestha R. Enhancing Colorectal Cancer Treatment: The Role of Bifidobacterium in Modulating Gut Immunity and Mitigating Capecitabine-Induced Toxicity. Molecular Nutrition & Food Research. 2025;69(9):e70023. PMID: 40109200
  2. Srinivasan D, Subbarayan R*, Krishnan M, Balakrishna R, Adtani P, Shrestha R*, Chauhan A, Babu S, Radhakrishnan A. Radiation therapy-induced normal tissue damage: involvement of EMT pathways and role of FLASH-RT in reducing toxicities. Radiat Environ Biophys. 2025 Jan 6.  PMID: 39760753. *Corresponding authors
  3. Balaji D, Balakrishnan R, Srinivasan D, Subbarayan R*, Shrestha R*, Srivastava N, Chauhan A. The Impact of SARS-CoV-2 on Liver Diseases and Potential Phytochemical Treatments. Infect Microbes Dis. 2024 Dec;6(4):p 177-188. *Corresponding authors
  4. Ferrena A*, Zhang X*, Shrestha R*, Zheng D, Liu W. Six3 and Six6 jointly control diverse target genes in multiple cell populations over developmental trajectories of mouse embryonic retinal progenitor cells. PLoS One. 2024 Oct 24;19(10):e0308839. PMID: 39446806. *Contributed equally to this work with
  5. Vijayakumar KK, Manoharan D, Subbarayan R, Shrestha R, Harshavardhan S. Construction of pVAX-1-based linear covalently closed vector with improved transgene expression. Mol Biol Rep. 2024 Aug 24;51(1):934. PMID: 39180671
  6. Subbarayan R, Srinivasan D, Sadullah Usmani S, Murugan Girija D, Ikhlas S, Srivastav N, Balakrishnan R, Shrestha R, Chauhan A. Molecular insights on Eltrombopag: potential mitogen stimulants, angiogenesis, and therapeutic radioprotectant through TPO-R activation. Platelets. 2024 Dec;35(1):2359028. PMID: 38832545.
  7. Subbarayan R, Murugan Girija D, Raja STK, Krishnamoorthy A, Srinivasan D, Shrestha R, Srivastava N, Ranga Rao S. Conditioned medium-enriched umbilical cord mesenchymal stem cells: a potential therapeutic strategy for spinal cord injury, unveiling transcriptomic and secretomic insights. Mol Biol Rep. 2024 Apr 24;51(1):570. PMID: 38658405.
  8. Adtani PN, Subbarayan R, Shrestha R, Elsayed W. Therapeutic potential of sulforaphane: modulation of NRF2-mediated PI3/AKT/mTOR pathway in oral fibrosis. Braz Dent Sci. 2024;27(1):e4172. 
  9. Balakrishnan R, Subbarayan R*, Shrestha R*, Chauhan A, Krishnamoorthy L. Exploring platelet-derived microvesicles in vascular regeneration: unraveling the intricate mechanisms and molecular mediators. Mol Biol Rep. 2024 Mar 6;51(1):393. doi: 10.1007/s11033-024-09302-1. PMID: 38446325. *Corresponding authors
  10. Liu W, Shrestha R, Lowe A, Zhang X, Spaeth L. Self-formation of concentric zones of telencephalic and ocular tissues and directional retinal ganglion cell axons. Elife. 2023 Sep 4;12:RP87306. doi: 10.7554/eLife.87306. PMID: 37665325.
  11. Shrestha R, Shrestha R, Khadka RB, Gyawali R. Primary Immune Response Provides Protective Efficacy against SARS-CoV-2 Reinfection. JNMA J Nepal Med Assoc. 2021 Jul 30;59(239):727-729. doi: 10.31729/jnma.5538. PMID: 34508515.
  12. Shrestha R, Wen YT, Tsai RK. Effective Differentiation and Biological Characterization of Retinal Pigment Epithelium Derived from Human Induced Pluripotent Stem Cells. Curr Eye Res. 2020 Sep;45(9):1155-1167. doi: 10.1080/02713683.2020.1722180. PMID: 31984806.
  13. Shrestha R. Induced pluripotent stem cells are Japanese brand sources for therapeutic cells to pretrial clinical research. Progress in Stem Cell. 2020 June; 7(1):296-303. doi: 10.15419/psc.v7i1.409.
  14. Shrestha R, Wen YT, Tsai RK. Induced pluripotent stem cells and derivative photoreceptor precursors as therapeutic cells for retinal degenerations. Ci Ji Yi Xue Za Zhi. 2020 Apr-Jun;32(2):101-112. doi: 10.4103/tcmj.tcmj_147_19. PMID: 32269941; PMCID: PMC7137374.
  15. Shrestha R, Wen YT, Tsai RK. Generation of hiPSC line TCIERi001-A from normal human epidermal keratinocytes. Stem Cell Res. 2019 Dec;41:101590. doi: 10.1016/j.scr.2019.101590. PMID: 31683100.
  16. Khadka S*, Shrestha R*, Pandit S, Pandit R, Bastola A. Late Response of Antiretroviral Therapy in an HIV-1-Infected Patient due to Hepatitis B and C Coinfections: The First Case Report in Nepal. Case Rep Med. 2019;2019:2070973. doi: 10.1155/2019/2070973. PMID: 30886633;  PMCID: PMC6388324.
  17. Shrestha R, Wen YT, Ding DC, Tsai RK. Aberrant hiPSCs-Derived from Human Keratinocytes Differentiates into 3D Retinal Organoids that Acquire Mature Photoreceptors. Cells. 2019 Jan 9;8(1). doi: 10.3390/cells8010036. PMID: 30634512; PMCID: PMC6356277.
  18. Shrestha R, Palat A, Punnoose AM, Joshi S, Ponraju D, Paul SF. Electrospun cellulose acetate phthalate nanofibrous scaffolds fabricated using novel solvent combinations biocompatible for primary chondrocytes and neurons. Tissue Cell. 2016 Dec;48(6):634-643. doi: 10.1016/j.tice.2016.07.007. PMID: 27546071.
  19. Shrestha R, Palat A, Anbarasan S, Paul S. Variation in growth pattern and morphological appearance of primary monolayer cultures of chondrocytes and neural cells isolated from the chick embryo at different stages. Acta Medica International. 2015; 2(2):61-67. doi: 10.5530/ami.2015.3.3.

Online News Portal Publications

  1. Rupendra Shrestha, April 9th, 2020. COVID-19: 50 Facts for Nepal. Disaster, Nature Khabar.
  2. Rupendra Shrestha, November 30th, 2018. First genetically engineered babies made in china: lulu and nana. Science and Technology, Nature Khabar.
  3. Rupendra Shrestha, July 17th, 2017. First 3D structures of active DNA: update on world DNA day. Science and Technology, Nature Khabar.
  4. Rupendra Shrestha, April 25th, 2017. DNA data storage: movie encoded in the genomes of living bacteria. Science and Technology, Nature Khabar.
  5. Rupendra Shrestha, April 15th, 2017. World’s first baby with three genetic parents: DNA breakthrough. Science and Technology, Nature Khabar.
  6. Rupendra Shrestha, April 11th, 2017. Molecular genetic testing: prominence and facilities in Nepal. Science and Technology, Nature Khabar.

You may have missed

mnfr70023-fig-0002-m

Enhancing Colorectal Cancer Treatment: The Role of Bifidobacterium in Modulating Gut Immunity and Mitigating Capecitabine-Induced Toxicity

Rupendra Shrestha March 20, 2025
EMT

Radiation therapy-induced normal tissue damage: involvement of EMT pathways and role of FLASH-RT in reducing toxicities.

Rupendra Shrestha January 6, 2025
Figure 3

The Impact of SARS-CoV-2 on Liver Diseases and Potential Phytochemical Treatments

Rupendra Shrestha December 24, 2024
journal.pone.0308839.g001

Six3 and Six6 jointly control diverse target genes in multiple cell populations over developmental trajectories of mouse embryonic retinal progenitor cells

Rupendra Shrestha October 24, 2024
11

Construction of pVAX-1-based linear covalently closed vector with improved transgene expression

Rupendra Shrestha August 25, 2024